利用扫描源光学相干断层扫描和数据增强训练的卷积神经网络早期诊断多发性硬化-2021年

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时间:2023-03-03

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Citation: López-Dorado, A.; Ortiz,
M.; Satue, M.; Rodrigo, M.J.; Barea,
R.; Sánchez-Morla, E.M.; Cavaliere,
C.; Rodríguez-Ascariz, J.M.;
Orduna-Hospital, E.; Boquete, L.;
et al. Early Diagnosis of Multiple
Sclerosis Using Swept-Source Optical
Coherence Tomography and
Convolutional Neural Networks
Trained with Data Augmentation.
Sensors 2022, 22, 167. https://
doi.org/10.3390/s22010167
Academic Editors: Juan
Pablo Martínez and
Andrea Facchinetti
Received: 3 November 2021
Accepted: 22 December 2021
Published: 27 December 2021
Publishers Note: MDPI stays neutral
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iations.
Copyright: © 2021 by the authors.
Licensee MDPI, Basel, Switzerland.
This article is an open access article
distributed under the terms and
conditions of the Creative Commons
Attribution (CC BY) license (https://
creativecommons.org/licenses/by/
4.0/).
sensors
Article
Early Diagnosis of Multiple Sclerosis Using Swept-Source
Optical Coherence Tomography and Convolutional Neural
Networks Trained with Data Augmentation
Almudena López-Dorado
1
, Miguel Ortiz
2
, María Satue
3
, María J. Rodrigo
3
, Rafael Barea
1
,
Eva M. Sánchez-Morla
4,5,6
, Carlo Cavaliere
1
, José M. Rodríguez-Ascariz
1
, Elvira Orduna-Hospital
3
,
Luciano Boquete
1,
* and Elena Garcia-Martin
3,
*
1
Biomedical Engineering Group, Department of Electronics, University of Alcalá, 28801 Alcalá de Henares,
Spain; almudena.lopez@uah.es (A.L.-D.); rafael.barea@uah.es (R.B.); carlo.cavaliere@uah.es (C.C.);
jmr.ascariz@uah.es (J.M.R.-A.)
2
Computer Vision, Imaging and Machine Intelligence Research Group, Interdisciplinary Center for Security,
Reliability and Trust (SnT), University of Luxembourg, 4365 Luxembourg, Luxembourg;
miguel.ortizdelcastillo@uni.lu
3
Miguel Servet Ophthalmology Innovation and Research Group (GIMSO), Department of Ophthalmology,
Aragon Institute for Health Research (IIS Aragon), Miguel Servet University Hospital, University of Zaragoza,
50018 Zaragoza, Spain; mariasatue@gmail.com (M.S.); mariajesusrodrigo@hotmail.es (M.J.R.);
elvira.orduna@gmail.com (E.O.-H.)
4
Department of Psychiatry, Hospital 12 de Octubre Research Institute (i+12), 28041 Madrid, Spain;
evamas01@ucm.es
5
Faculty of Medicine, Complutense University of Madrid, 28040 Madrid, Spain
6
Biomedical Research Networking Centre in Mental Health (CIBERSAM), 28029 Madrid, Spain
* Correspondence: luciano.boquete@uah.es (L.B.); egmvivax@yahoo.com (E.G.-M.)
Abstract:
Background: The aim of this paper is to implement a system to facilitate the diagnosis of
multiple sclerosis (MS) in its initial stages. It does so using a convolutional neural network (CNN)
to classify images captured with swept-source optical coherence tomography (SS-OCT). Methods:
SS-OCT images from 48 control subjects and 48 recently diagnosed MS patients have been used. These
images show the thicknesses (45
×
60 points) of the following structures: complete retina, retinal
nerve fiber layer, two ganglion cell layers (GCL+, GCL++) and choroid. The Cohen distance is used to
identify the structures and the regions within them with greatest discriminant capacity. The original
database of OCT images is augmented by a deep convolutional generative adversarial network to
expand the CNN’s training set. Results: The retinal structures with greatest discriminant capacity are
the GCL++ (44.99% of image points), complete retina (26.71%) and GCL+ (22.93%). Thresholding
these images and using them as inputs to a CNN comprising two convolution modules and one
classification module obtains sensitivity = specificity = 1.0. Conclusions: Feature pre-selection and the
use of a convolutional neural network may be a promising, nonharmful, low-cost, easy-to-perform
and effective means of assisting the early diagnosis of MS based on SS-OCT thickness data.
Keywords:
multiple sclerosis; optical coherence tomography; convolutional neural network; generative
adversarial network
1. Introduction
In recent years, the usefulness of deep learning (DL) techniques has been demon-
strated in many applications, including in medicine [
1
]. Most medical applications have
been in specialties related to diagnostic imaging, such as radiology or dermatology [
1
6
],
in genomics [
7
,
8
] and, in lower numbers, in one-dimensional signal analysis, such as elec-
troencephalograms (EEG) [
9
13
], electrodermal activity [
14
] and electrocardiograms (ECG)
used in arrhythmia classification [15,16].
Sensors 2022, 22, 167. https://doi.org/10.3390/s22010167 https://www.mdpi.com/journal/sensors
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